Mcm1Arg80 Ancestral Library

If you use these results in your work, please cite: Hanson-Smith and Johnson, PLoS Comp. Bio., 2016


Overview | Alignments | Sites | Trees | Ancestors | Mutations


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Select a tree and branch by choosing a combination of one alignment method, one phylogenetic model, and two ancestral nodes on the maximum likelihood tree from that method-model combo.

Alignment Method:

Markov Model:

 

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From Ancestor:

To Ancestor:


(Optional) Map Mutations to Sequence:

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Summary

There are 23 substitutions with strong support on the branch(es) connecting Node46 to Node74. These substitutions are listed below:

Site in msaprobs

Site in msaprobs

The index of the substitution sequence site in the alignment generated by msaprobs.

Site in ABR.ancMcm1

Site in ABR.ancMcm1

The index of the substitution sequence site in the present-day sequence named ABR.ancMcm1. Due to the placement of insertion/deletion characters within the sequence alignment, the sequence index for ABR.ancMcm1 if likely to be different from the overall sequence index for the alignment msaprobs.

Substitution

Substitution

The amino acid substitution is represented as X→Y, where X is the ancestral state and Y is the descendant state. In some cases, the mutation reported here may be from the same state (i.e., X→X). In this case, scroll down to the 'Detail' table, and you'll see that other alignments and models support a substitution at this site (i.e. X→Y), but the method and model you've currently selected is an outlier and does not support the substition.

Weight

Weight

This is a count of the number of pairs of alignment method and phylogenetic model that strongly support a substitution at this sequence site.

244 14 AE 3
248 18 VI 3
249 19 PE 4
252 22 YF 4
264 34 AS 4
267 37 RK 4
275 45 YF 4
283 53 AT 4
284 54 NQ 4
289 59 IV 4
290 60 LV 4
293 62 NE 3
294 63 ST 4
301 70 TS 4
305 74 LF 4
308 77 VI 4
309 78 IV 4
310 79 RT 4
311 80 DQ 4
312 81 DQ 4
315 84 KR 4
319 88 RQ 4
320 89 KA 4

Detail

The following table shows the substitution profile at every site on the branch(es) connecting Node46 to Node74:

Site in msaprobs Site in ABR....ancMcm1 PROTCATLG msaprobs PROTCATWAG msaprobs PROTCATJTT msaprobs PROTGAMMAWAG msaprobs
Site 1 1: M M (1.0)→
M (1.0)
M (1.0)→
M (1.0)
M (1.0)→
M (1.0)
M (1.0)→
M (1.0)
Site 2 2: S N (0.189)→
S (1.0)
K (0.168)→
S (1.0)
N (0.246)→
S (0.999)
T (0.144)→
S (1.0)
Site 3 3: D A (0.231)→
D (0.999)
S (0.195)→
D (1.0)
G (0.271)→
D (0.996)
S (0.18)→
D (1.0)
Site 4 4: A Q (0.167)→
T (0.652)
Q (0.161)→
T (0.738)
Q (0.151)→
T (0.456)
Q (0.168)→
T (0.816)
Site 41 none none

none
L (0.17)→
none
none

none
L (0.131)→
none
Site 42 none none

none
q (0.146)→
none
none

none
q (0.14)→
none
Site 43 none none

none
D (0.129)→
none
none

none
q (0.124)→
none
Site 44 none none

none
V (0.213)→
none
none

none
V (0.171)→
none
Site 45 none none

none
p (0.222)→
none
none

none
p (0.176)→
none
Site 46 none S (0.37)→
none
S (0.336)→
none
S (0.253)→
none
S (0.268)→
none
Site 47 none Q (0.139)→
none
L (0.142)→
none
Q (0.145)→
none
L (0.153)→
none
Site 48 none Q (0.137)→
none
Q (0.131)→
none
Q (0.132)→
none
Q (0.124)→
none
Site 49 none Q (0.126)→
none
Q (0.127)→
none
Q (0.12)→
none
Q (0.128)→
none
Site 50 none T (0.194)→
none
T (0.243)→
none
T (0.205)→
none
T (0.226)→
none
Site 51 none S (0.925)→
none
S (0.936)→
none
S (0.945)→
none
S (0.927)→
none
Site 52 none Q (0.15)→
none
K (0.169)→
none
Q (0.162)→
none
K (0.152)→
none
Site 53 none V (0.924)→
none
V (0.942)→
none
V (0.931)→
none
V (0.949)→
none
Site 54 none Q (0.164)→
none
Q (0.156)→
none
Q (0.152)→
none
Q (0.149)→
none
Site 55 none T (0.124)→
none
T (0.128)→
none
T (0.139)→
none
I (0.096)→
none
Site 56 none V (0.122)→
none
V (0.158)→
none
Q (0.112)→
none
V (0.225)→
none
Site 57 none D (0.17)→
none
N (0.156)→
none
N (0.131)→
none
N (0.166)→
none
Site 58 none Q (0.215)→
none
Q (0.23)→
none
Q (0.204)→
none
Q (0.271)→
none
Site 59 none T (0.222)→
none
T (0.246)→
none
T (0.34)→
none
N (0.221)→
none
Site 60 none Q (0.217)→
none
Q (0.216)→
none
Q (0.192)→
none
E (0.216)→
none
Site 61 none Q (0.122)→
none
Q (0.123)→
none
G (0.118)→
none
Q (0.124)→
none
Site in msaprobs Site in ABR....ancMcm1 PROTCATLG msaprobs PROTCATWAG msaprobs PROTCATJTT msaprobs PROTGAMMAWAG msaprobs
Site 62 none Q (0.152)→
none
Q (0.151)→
none
Q (0.152)→
none
Q (0.144)→
none
Site 63 none Q (0.153)→
none
Q (0.151)→
none
Q (0.138)→
none
Q (0.163)→
none
Site 64 none Q (0.14)→
none
Q (0.138)→
none
Q (0.134)→
none
Q (0.138)→
none
Site 65 none Q (0.149)→
none
Q (0.152)→
none
Q (0.154)→
none
Q (0.149)→
none
Site 66 none G (0.437)→
none
G (0.444)→
none
G (0.331)→
none
G (0.361)→
none
Site 67 none Q (0.145)→
none
Q (0.144)→
none
Q (0.124)→
none
Q (0.156)→
none
Site 68 none Q (0.147)→
none
Q (0.145)→
none
Q (0.131)→
none
Q (0.146)→
none
Site 69 none P (0.186)→
none
P (0.187)→
none
P (0.124)→
none
P (0.197)→
none
Site 70 none G (0.137)→
none
Q (0.128)→
none
Q (0.127)→
none
Q (0.134)→
none
Site 71 none Q (0.098)→
none
Q (0.107)→
none
Q (0.111)→
none
Q (0.103)→
none
Site 72 none P (0.33)→
none
P (0.326)→
none
P (0.2)→
none
P (0.34)→
none
Site 73 none G (0.32)→
none
G (0.343)→
none
G (0.268)→
none
G (0.364)→
none
Site 74 none Q (0.164)→
none
Q (0.157)→
none
Q (0.131)→
none
Q (0.163)→
none
Site 75 none Q (0.135)→
none
Q (0.133)→
none
Q (0.128)→
none
Q (0.134)→
none
Site 76 5: E Q (0.165)→
E (0.938)
Q (0.138)→
E (0.919)
Q (0.138)→
E (0.899)
Q (0.141)→
E (0.929)
Site 80 6: K Q (0.134)→
N (0.455)
G (0.147)→
D (0.537)
Q (0.13)→
N (0.475)
G (0.16)→
D (0.531)
Site 90 none Q (0.14)→
T (0.152)
Q (0.14)→
T (0.15)
Q (0.143)→
T (0.277)
Q (0.14)→
T (0.18)
Site 92 none none

none
G (0.164)→
none
none

none
G (0.149)→
none
Site 93 none none

none
S (0.27)→
none
none

none
S (0.326)→
none
Site 94 none none

none
Q (0.139)→
none
none

none
Q (0.137)→
none
Site 95 none none

none
Q (0.134)→
none
none

none
Q (0.132)→
none
Site 96 none none

none
Q (0.154)→
none
none

none
Q (0.155)→
none
Site 97 none none

none
E (0.191)→
none
none

none
E (0.214)→
none
Site 98 none none

none
Q (0.151)→
none
none

none
Q (0.152)→
none
Site 99 none none

none
Q (0.146)→
none
none

none
Q (0.147)→
none
Site in msaprobs Site in ABR....ancMcm1 PROTCATLG msaprobs PROTCATWAG msaprobs PROTCATJTT msaprobs PROTGAMMAWAG msaprobs
Site 100 none none

none
Q (0.14)→
none
none

none
Q (0.139)→
none
Site 101 none none

none
Q (0.139)→
none
none

none
Q (0.136)→
none
Site 102 none none

none
Q (0.135)→
none
none

none
Q (0.134)→
none
Site 103 none none

none
Q (0.121)→
none
none

none
Q (0.122)→
none
Site 104 none none

none
G (0.214)→
none
none

none
G (0.25)→
none
Site 105 none none

none
G (0.241)→
none
none

none
G (0.289)→
none
Site 106 none none

none
Q (0.138)→
none
none

none
Q (0.138)→
none
Site 107 none none

none
Q (0.133)→
none
none

none
Q (0.132)→
none
Site 108 none none

none
Q (0.175)→
none
none

none
Q (0.174)→
none
Site 109 none none

none
Q (0.139)→
none
none

none
Q (0.138)→
none
Site 110 none none

none
Q (0.14)→
none
none

none
Q (0.141)→
none
Site 111 none none

none
G (0.429)→
none
none

none
G (0.433)→
none
Site 112 none none

none
Q (0.147)→
none
none

none
Q (0.145)→
none
Site 113 none none

none
Q (0.135)→
none
none

none
Q (0.133)→
none
Site 114 none none

none
Q (0.139)→
none
none

none
Q (0.14)→
none
Site 115 none none

none
Q (0.153)→
none
none

none
Q (0.158)→
none
Site 116 none none

none
Q (0.163)→
none
none

none
Q (0.174)→
none
Site 117 none none

none
Q (0.141)→
none
none

none
Q (0.143)→
none
Site 118 none none

none
Q (0.14)→
none
none

none
Q (0.141)→
none
Site 119 none none

none
Q (0.138)→
none
none

none
Q (0.14)→
none
Site 120 none none

none
D (0.173)→
none
none

none
N (0.177)→
none
Site 121 none none

none
Q (0.149)→
none
none

none
Q (0.15)→
none
Site 122 none none

none
Q (0.138)→
none
none

none
Q (0.14)→
none
Site 123 none none

none
Q (0.143)→
none
none

none
Q (0.143)→
none
Site 124 none none

none
Q (0.163)→
none
none

none
Q (0.171)→
none
Site in msaprobs Site in ABR....ancMcm1 PROTCATLG msaprobs PROTCATWAG msaprobs PROTCATJTT msaprobs PROTGAMMAWAG msaprobs
Site 125 none none

none
D (0.221)→
none
none

none
D (0.252)→
none
Site 126 none none

none
Q (0.176)→
none
none

none
Q (0.178)→
none
Site 127 none none

none
D (0.555)→
none
none

none
D (0.587)→
none
Site 128 none none

none
Q (0.114)→
none
none

none
V (0.124)→
none
Site 129 none none

none
G (0.174)→
none
none

none
G (0.191)→
none
Site 130 none none

none
Q (0.137)→
none
none

none
Q (0.135)→
none
Site 131 none none

none
D (0.494)→
none
none

none
D (0.6)→
none
Site 132 none none

none
D (0.205)→
none
none

none
D (0.233)→
none
Site 133 none none

none
E (0.27)→
none
none

none
E (0.328)→
none
Site 134 none none

none
D (0.261)→
none
none

none
D (0.294)→
none
Site 135 none none

none
D (0.171)→
none
none

none
D (0.179)→
none
Site 136 none none

none
Q (0.166)→
none
none

none
Q (0.176)→
none
Site 137 none none

none
E (0.241)→
none
none

none
E (0.289)→
none
Site 138 none none

none
Q (0.141)→
none
none

none
Q (0.135)→
none
Site 139 none none

none
S (0.428)→
none
none

none
S (0.491)→
none
Site 140 none none

none
Q (0.147)→
none
none

none
Q (0.145)→
none
Site 141 none none

none
V (0.292)→
none
none

none
V (0.294)→
none
Site 142 none none

none
E (0.759)→
none
none

none
E (0.754)→
none
Site 143 none none

none
Q (0.135)→
none
none

none
Q (0.133)→
none
Site 144 none none

none
Q (0.139)→
none
none

none
Q (0.136)→
none
Site 145 none none

none
Q (0.14)→
none
none

none
Q (0.138)→
none
Site 146 none none

none
Q (0.136)→
none
none

none
Q (0.132)→
none
Site 147 none none

none
Q (0.128)→
none
none

none
Q (0.124)→
none
Site 148 none none

none
Q (0.147)→
none
none

none
Q (0.143)→
none
Site 149 none none

none
T (0.169)→
none
none

none
T (0.178)→
none
Site in msaprobs Site in ABR....ancMcm1 PROTCATLG msaprobs PROTCATWAG msaprobs PROTCATJTT msaprobs PROTGAMMAWAG msaprobs
Site 150 none none

none
T (0.216)→
none
none

none
T (0.242)→
none
Site 151 none none

none
T (0.697)→
none
none

none
T (0.783)→
none
Site 152 none none

none
P (0.146)→
none
none

none
P (0.16)→
none
Site 153 none none

none
T (0.487)→
none
none

none
T (0.566)→
none
Site 154 none D (0.18)→
E (0.73)
D (0.186)→
E (0.614)
D (0.378)→
E (0.746)
D (0.272)→
E (0.789)
Site 221 none none

E (0.288)
none

E (0.284)
none

E (0.33)
none

E (0.274)
Site 222 none D (0.402)→
D (0.994)
D (0.393)→
D (0.998)
D (0.478)→
D (0.996)
N (0.321)→
D (0.998)
Site 223 none D (0.223)→
S (0.405)
T (0.199)→
N (0.553)
D (0.158)→
N (0.63)
T (0.187)→
N (0.5)
Site 226 none Q (0.159)→
S (0.356)
Q (0.16)→
S (0.581)
Q (0.172)→
S (0.363)
P (0.196)→
S (0.7)
Site 230 none D (0.19)→
S (0.809)
Q (0.149)→
S (0.764)
D (0.344)→
S (0.797)
Q (0.142)→
S (0.656)
Site 231 none L (0.156)→
A (0.663)
L (0.157)→
A (0.5)
Q (0.115)→
S (0.507)
V (0.121)→
S (0.484)
Site 232 none Q (0.162)→
S (0.922)
Q (0.164)→
S (0.979)
Q (0.162)→
S (0.935)
Q (0.161)→
S (0.984)
Site 233 7: A Q (0.139)→
S (0.854)
Q (0.136)→
S (0.949)
Q (0.12)→
S (0.754)
Q (0.146)→
S (0.953)
Site 238 8: E Q (0.139)→
S (0.182)
Q (0.138)→
S (0.356)
Q (0.134)→
S (0.297)
Q (0.137)→
S (0.389)
Site 239 9: Q Q (0.166)→
T (0.687)
Q (0.157)→
T (0.934)
Q (0.157)→
T (0.754)
Q (0.148)→
T (0.946)
Site 240 10: P Q (0.17)→
S (0.415)
Q (0.155)→
S (0.595)
D (0.205)→
S (0.703)
Q (0.156)→
S (0.542)
Site 241 11: Q P (0.233)→
S (0.527)
P (0.209)→
S (0.537)
Q (0.135)→
S (0.429)
P (0.17)→
S (0.546)
Site 242 12: Q T (0.192)→
Q (0.843)
Q (0.142)→
Q (0.859)
Q (0.148)→
Q (0.67)
S (0.138)→
Q (0.882)
Site 243 13: K S (0.231)→
K (1.0)
S (0.309)→
K (1.0)
G (0.435)→
K (1.0)
S (0.406)→
K (1.0)
Site 244 14: E A (0.375)→
E (1.0)
A (0.524)→
E (1.0)
A (0.414)→
E (1.0)
A (0.562)→
E (1.0)
Site 245 15: R R (0.993)→
R (1.0)
R (1.0)→
R (1.0)
R (0.998)→
R (1.0)
R (1.0)→
R (1.0)
Site 246 16: R R (1.0)→
R (1.0)
R (1.0)→
R (1.0)
R (1.0)→
R (1.0)
R (0.999)→
R (1.0)
Site 247 17: K K (1.0)→
K (1.0)
K (1.0)→
K (1.0)
K (1.0)→
K (1.0)
K (1.0)→
K (1.0)
Site 248 18: I V (0.59)→
I (1.0)
V (0.548)→
I (1.0)
V (0.822)→
I (1.0)
I (0.524)→
I (1.0)
Site 249 19: E P (1.0)→
E (1.0)
P (1.0)→
E (1.0)
P (1.0)→
E (1.0)
P (1.0)→
E (1.0)
Site in msaprobs Site in ABR....ancMcm1 PROTCATLG msaprobs PROTCATWAG msaprobs PROTCATJTT msaprobs PROTGAMMAWAG msaprobs
Site 250 20: I I (0.996)→
I (1.0)
I (0.996)→
I (1.0)
I (0.998)→
I (1.0)
I (0.997)→
I (1.0)
Site 251 21: K K (1.0)→
K (1.0)
K (1.0)→
K (1.0)
K (1.0)→
K (1.0)
K (1.0)→
K (1.0)
Site 252 22: F Y (1.0)→
F (1.0)
Y (1.0)→
F (1.0)
Y (1.0)→
F (1.0)
Y (1.0)→
F (1.0)
Site 253 23: I I (0.99)→
I (1.0)
I (0.988)→
I (1.0)
I (0.995)→
I (1.0)
I (0.993)→
I (1.0)
Site 254 24: Q E (1.0)→
E (1.0)
E (1.0)→
E (1.0)
E (1.0)→
E (1.0)
E (1.0)→
E (1.0)
Site 255 25: D N (1.0)→
N (1.0)
N (1.0)→
N (1.0)
N (1.0)→
N (1.0)
N (1.0)→
N (1.0)
Site 256 26: K R (0.833)→
K (1.0)
K (0.813)→
K (1.0)
R (0.674)→
K (1.0)
K (0.89)→
K (1.0)
Site 257 27: T T (1.0)→
T (1.0)
T (1.0)→
T (1.0)
T (1.0)→
T (1.0)
T (1.0)→
T (1.0)
Site 258 28: R R (1.0)→
R (1.0)
R (1.0)→
R (1.0)
R (1.0)→
R (1.0)
R (1.0)→
R (1.0)
Site 259 29: R R (1.0)→
R (1.0)
R (1.0)→
R (1.0)
R (1.0)→
R (1.0)
R (1.0)→
R (1.0)
Site 260 30: H H (0.993)→
H (1.0)
H (0.99)→
H (1.0)
H (0.991)→
H (1.0)
H (0.994)→
H (1.0)
Site 261 31: I V (1.0)→
V (1.0)
V (1.0)→
V (1.0)
V (1.0)→
V (1.0)
V (1.0)→
V (1.0)
Site 262 32: T T (1.0)→
T (1.0)
T (1.0)→
T (1.0)
T (1.0)→
T (1.0)
T (1.0)→
T (1.0)
Site 263 33: F F (1.0)→
F (1.0)
F (1.0)→
F (1.0)
F (1.0)→
F (1.0)
F (1.0)→
F (1.0)
Site 264 34: S A (1.0)→
S (1.0)
A (1.0)→
S (1.0)
A (1.0)→
S (1.0)
A (1.0)→
S (1.0)
Site 265 35: K K (1.0)→
K (1.0)
K (1.0)→
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K (1.0)→
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K (1.0)→
K (1.0)
Site 266 36: R R (1.0)→
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R (1.0)
Site 267 37: K R (1.0)→
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R (1.0)→
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R (1.0)→
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R (1.0)→
K (1.0)
Site 268 38: H H (1.0)→
H (1.0)
H (1.0)→
H (1.0)
H (1.0)→
H (1.0)
H (1.0)→
H (1.0)
Site 269 39: G G (1.0)→
G (1.0)
G (1.0)→
G (1.0)
G (1.0)→
G (1.0)
G (1.0)→
G (1.0)
Site 270 40: I I (1.0)→
I (1.0)
I (1.0)→
I (1.0)
I (1.0)→
I (1.0)
I (1.0)→
I (1.0)
Site 271 41: M M (1.0)→
M (1.0)
M (1.0)→
M (1.0)
M (1.0)→
M (1.0)
M (1.0)→
M (1.0)
Site 272 42: K K (1.0)→
K (1.0)
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K (1.0)
Site 273 43: K K (1.0)→
K (1.0)
K (1.0)→
K (1.0)
K (1.0)→
K (1.0)
K (1.0)→
K (1.0)
Site 274 44: A A (1.0)→
A (1.0)
A (1.0)→
A (1.0)
A (1.0)→
A (1.0)
A (1.0)→
A (1.0)
Site in msaprobs Site in ABR....ancMcm1 PROTCATLG msaprobs PROTCATWAG msaprobs PROTCATJTT msaprobs PROTGAMMAWAG msaprobs
Site 275 45: Y Y (1.0)→
F (1.0)
Y (1.0)→
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Y (1.0)→
F (1.0)
Y (1.0)→
F (1.0)
Site 276 46: E E (1.0)→
E (1.0)
E (1.0)→
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E (1.0)→
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E (1.0)
Site 277 47: L L (1.0)→
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L (1.0)
Site 278 48: S S (0.993)→
S (1.0)
S (0.994)→
S (1.0)
S (0.996)→
S (1.0)
S (0.995)→
S (1.0)
Site 279 49: V V (1.0)→
V (1.0)
V (1.0)→
V (1.0)
V (1.0)→
V (1.0)
V (1.0)→
V (1.0)
Site 280 50: L L (0.993)→
L (1.0)
L (0.993)→
L (1.0)
L (0.988)→
L (1.0)
L (0.995)→
L (1.0)
Site 281 51: T T (1.0)→
T (1.0)
T (1.0)→
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T (1.0)
Site 282 52: G G (1.0)→
G (1.0)
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G (1.0)→
G (1.0)
Site 283 53: T A (0.988)→
T (1.0)
A (0.986)→
T (1.0)
A (0.991)→
T (1.0)
A (0.992)→
T (1.0)
Site 284 54: Q N (1.0)→
Q (1.0)
N (1.0)→
Q (1.0)
N (1.0)→
Q (1.0)
N (1.0)→
Q (1.0)
Site 285 55: V V (0.966)→
V (1.0)
V (0.953)→
V (1.0)
V (0.917)→
V (1.0)
V (0.966)→
V (1.0)
Site 286 56: L L (1.0)→
L (1.0)
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Site 287 57: L L (1.0)→
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Site 288 58: L L (1.0)→
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Site 289 59: V I (1.0)→
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I (1.0)→
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I (1.0)→
V (1.0)
Site 290 60: V L (1.0)→
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L (1.0)→
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Site 291 61: S S (1.0)→
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S (1.0)
Site 293 62: E N (0.522)→
E (1.0)
S (0.4)→
E (1.0)
N (0.531)→
E (1.0)
S (0.507)→
E (1.0)
Site 294 63: T S (0.978)→
T (1.0)
S (0.996)→
T (1.0)
S (0.994)→
T (1.0)
S (0.997)→
T (1.0)
Site 295 64: G G (1.0)→
G (1.0)
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G (1.0)
Site 296 65: L L (1.0)→
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Site 297 66: V V (1.0)→
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Site 298 67: Y Y (1.0)→
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Y (1.0)
Site 299 68: T T (1.0)→
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Site 300 69: F F (1.0)→
F (1.0)
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F (1.0)
Site in msaprobs Site in ABR....ancMcm1 PROTCATLG msaprobs PROTCATWAG msaprobs PROTCATJTT msaprobs PROTGAMMAWAG msaprobs
Site 301 70: T T (0.602)→
S (1.0)
T (0.499)→
S (1.0)
T (0.806)→
S (1.0)
T (0.626)→
S (1.0)
Site 302 71: T T (1.0)→
T (1.0)
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T (1.0)→
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T (1.0)
Site 303 72: P P (1.0)→
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P (1.0)
Site 304 73: K K (0.998)→
K (1.0)
K (0.997)→
K (1.0)
K (0.998)→
K (1.0)
K (0.997)→
K (1.0)
Site 305 74: F L (1.0)→
F (1.0)
L (1.0)→
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F (1.0)
Site 306 75: Q E (0.993)→
E (1.0)
E (0.988)→
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E (0.996)→
E (1.0)
E (0.991)→
E (1.0)
Site 307 76: P P (1.0)→
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P (1.0)
Site 308 77: I V (0.54)→
I (1.0)
V (0.534)→
I (1.0)
V (0.576)→
I (1.0)
V (0.672)→
I (1.0)
Site 309 78: V I (0.814)→
V (1.0)
I (0.998)→
V (1.0)
I (0.706)→
V (1.0)
I (0.998)→
V (1.0)
Site 310 79: T R (1.0)→
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R (1.0)→
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R (1.0)→
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R (1.0)→
T (1.0)
Site 311 80: Q D (0.868)→
Q (1.0)
D (0.998)→
Q (1.0)
D (0.953)→
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D (0.998)→
Q (1.0)
Site 312 81: P D (0.479)→
Q (1.0)
D (0.591)→
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E (0.578)→
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D (0.646)→
Q (1.0)
Site 313 82: E E (0.998)→
E (1.0)
E (0.995)→
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E (1.0)
Site 314 83: G G (1.0)→
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G (1.0)
Site 315 84: K K (1.0)→
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K (1.0)→
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K (1.0)→
R (1.0)
Site 316 85: N E (0.699)→
N (1.0)
N (0.655)→
N (1.0)
N (0.442)→
N (1.0)
N (0.775)→
N (1.0)
Site 317 86: L L (1.0)→
L (1.0)
L (1.0)→
L (1.0)
L (1.0)→
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L (1.0)→
L (1.0)
Site 318 87: I I (0.999)→
I (1.0)
I (1.0)→
I (1.0)
I (1.0)→
I (1.0)
I (1.0)→
I (1.0)
Site 319 88: Q R (1.0)→
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R (1.0)→
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R (1.0)→
Q (1.0)
R (1.0)→
Q (1.0)
Site 320 89: A K (0.992)→
A (1.0)
K (0.981)→
A (1.0)
K (0.972)→
A (1.0)
K (0.986)→
A (1.0)
Site 321 90: C C (1.0)→
C (1.0)
C (1.0)→
C (1.0)
C (1.0)→
C (1.0)
C (1.0)→
C (1.0)
Site 322 91: L L (1.0)→
L (1.0)
L (1.0)→
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L (1.0)→
L (1.0)
L (1.0)→
L (1.0)
Site 323 92: N N (0.999)→
N (1.0)
N (1.0)→
N (1.0)
N (0.999)→
N (1.0)
N (1.0)→
N (1.0)
Site 324 93: A A (0.972)→
A (1.0)
A (0.971)→
A (1.0)
A (0.985)→
A (1.0)
A (0.975)→
A (1.0)
Site 325 94: P P (0.267)→
P (1.0)
P (0.427)→
P (1.0)
E (0.743)→
P (1.0)
P (0.597)→
P (1.0)
Site in msaprobs Site in ABR....ancMcm1 PROTCATLG msaprobs PROTCATWAG msaprobs PROTCATJTT msaprobs PROTGAMMAWAG msaprobs
Site 326 95: E D (0.698)→
D (1.0)
D (0.82)→
D (1.0)
D (0.841)→
D (1.0)
D (0.894)→
D (1.0)
Site 327 96: E S (0.301)→
E (1.0)
A (0.347)→
E (1.0)
A (0.328)→
E (0.997)
A (0.269)→
E (1.0)
Site 328 97: E P (0.206)→
E (0.606)
G (0.238)→
E (0.612)
G (0.523)→
E (0.756)
P (0.214)→
E (0.521)
Site 329 98: E none

E (0.999)
none

E (0.999)
none

E (0.998)
none

E (1.0)
Site 330 99: E none

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Site 332 101: E none

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Site 333 102: D none

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Site 337 103: E none

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Site 338 104: D none

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Site 339 105: E none

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Site 340 106: D none

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Site 341 107: E none

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Site 342 108: V none

E (0.887)
none

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E (0.88)
Site 343 none none

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none

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Site 344 none none

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E (0.22)
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Site 436 none none

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Site 437 none none

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Site 442 none none

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Site 443 none none

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P (0.775)
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Site 444 none none

P (0.809)
none

P (0.757)
none

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none

none
Site in msaprobs Site in ABR....ancMcm1 PROTCATLG msaprobs PROTCATWAG msaprobs PROTCATJTT msaprobs PROTGAMMAWAG msaprobs
Site 445 none none

V (0.213)
none

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Site 460 111: E none

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Site 596 136: P none

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Q (0.254)
Site in msaprobs Site in ABR....ancMcm1 PROTCATLG msaprobs PROTCATWAG msaprobs PROTCATJTT msaprobs PROTGAMMAWAG msaprobs
Site 597 137: V none

P (0.403)
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Site 602 142: P none

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Site 604 144: D none

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Site 608 148: A none

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Site 609 149: A none

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Site 610 150: H none

H (0.628)
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H (0.655)
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H (0.68)
Site 611 151: S none

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Site 612 152: V none

Q (0.308)
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Site 613 153: A none

V (0.251)
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Site 614 154: A none

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Site 615 155: A none

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Site 616 156: T none

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Site 617 157: A none

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Q (0.986)
none

Q (0.971)
none

Q (0.989)
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Q (0.354)
none

Q (0.332)
none

Q (0.394)
none

Q (0.349)
Site 621 161: A none

Q (0.675)
none

Q (0.774)
none

Q (0.813)
none

Q (0.687)
Site in msaprobs Site in ABR....ancMcm1 PROTCATLG msaprobs PROTCATWAG msaprobs PROTCATJTT msaprobs PROTGAMMAWAG msaprobs
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P (0.611)
none

P (0.628)
none

P (0.714)
none

P (0.634)
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Q (0.653)
none

Q (0.82)
none

Q (0.746)
none

Q (0.885)
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Q (0.248)
none

Q (0.315)
none

Q (0.391)
none

Q (0.35)
Site 625 165: H none

P (0.393)
none

P (0.461)
none

L (0.342)
none

P (0.622)
Site 626 166: H none

D (0.196)
none

A (0.188)
none

A (0.299)
none

A (0.271)
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V (0.207)
none

T (0.189)
none

V (0.13)
none

T (0.223)
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G (0.129)
none

G (0.138)
none

G (0.105)
none

G (0.195)
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Q (0.171)
none

Q (0.194)
none

Q (0.171)
none

Q (0.194)
Site 630 170: S none

Q (0.225)
none

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none

H (0.607)
none

H (0.303)
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P (0.668)
none

P (0.811)
none

P (0.936)
none

P (0.84)
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Q (0.546)
none

P (0.455)
none

Q (0.528)
none

Q (0.491)
Site 633 173: Q none

H (0.736)
none

H (0.805)
none

H (0.75)
none

H (0.923)
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N (0.185)
none

N (0.189)
none

N (0.239)
none

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Q (0.999)
none

Q (0.999)
none

Q (0.998)
none

Q (1.0)
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G (0.387)
none

G (0.388)
none

G (0.315)
none

G (0.399)
Site 637 none none

Q (0.151)
none

Q (0.164)
none

Q (0.146)
none

Q (0.164)
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none

Q (0.248)
none

Q (0.244)
none

Q (0.252)
Site 639 none none

Q (0.755)
none

Q (0.798)
none

Q (0.809)
none

Q (0.819)
Site 640 none none

Q (0.349)
none

Q (0.343)
none

Q (0.276)
none

Q (0.35)
Site 641 none none

P (0.148)
none

Q (0.145)
none

Q (0.154)
none

P (0.153)
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G (0.305)
none

G (0.285)
none

Q (0.174)
none

G (0.409)
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F (0.935)
none

F (0.98)
none

F (0.929)
none

F (0.994)
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P (0.241)
none

P (0.221)
none

P (0.167)
none

P (0.263)
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N (0.79)
none

N (0.931)
none

N (0.625)
none

N (0.99)
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Q (0.533)
none

Q (0.481)
none

Q (0.374)
none

Q (0.302)
Site in msaprobs Site in ABR....ancMcm1 PROTCATLG msaprobs PROTCATWAG msaprobs PROTCATJTT msaprobs PROTGAMMAWAG msaprobs
Site 647 none none

N (0.216)
none

G (0.304)
none

Q (0.181)
none

G (0.388)
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S (0.816)
none

S (0.909)
none

S (0.798)
none

S (0.965)
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P (0.481)
none

P (0.803)
none

P (0.771)
none

P (0.972)
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Y (0.999)
none

Y (1.0)
none

Y (1.0)
none

Y (1.0)
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L (0.818)
none

L (0.955)
none

L (0.959)
none

L (0.991)
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N (0.974)
none

N (0.99)
none

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none

N (0.998)
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G (0.16)
none

G (0.201)
none

G (0.196)
none

G (0.209)
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none

Q (0.458)
none

Q (0.406)
none

Q (0.468)
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A (0.533)
none

A (0.719)
none

A (0.6)
none

A (0.788)
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E (0.783)
none

E (0.891)
none

E (0.779)
none

E (0.935)
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Q (0.995)
none

Q (0.997)
none

Q (0.992)
none

Q (0.998)
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N (1.0)
none

N (1.0)
none

N (1.0)
none

N (1.0)
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A (0.999)
none

A (1.0)
none

A (1.0)
none

A (1.0)
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V (0.997)
none

V (0.999)
none

V (0.998)
none

V (0.999)
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Y (1.0)
none

Y (1.0)
none

Y (1.0)
none

Y (1.0)
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Q (0.399)
none

Q (0.402)
none

Q (0.407)
none

Q (0.404)
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H (0.302)
none

H (0.327)
none

H (0.282)
none

H (0.33)
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Y (0.43)
none

Y (0.444)
none

Y (0.425)
none

Y (0.447)
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L (0.434)
none

L (0.444)
none

L (0.421)
none

L (0.447)
Site 666 none none

S (0.322)
none

S (0.347)
none

S (0.317)
none

S (0.35)
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M (0.319)
none

M (0.347)
none

M (0.341)
none

M (0.35)
Site 668 none none

P (0.481)
none

P (0.458)
none

P (0.389)
none

P (0.461)
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Q (0.399)
none

Q (0.402)
none

Q (0.407)
none

Q (0.404)
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Q (0.399)
none

Q (0.402)
none

Q (0.407)
none

Q (0.404)
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Q (0.399)
none

Q (0.402)
none

Q (0.407)
none

Q (0.404)
Site in msaprobs Site in ABR....ancMcm1 PROTCATLG msaprobs PROTCATWAG msaprobs PROTCATJTT msaprobs PROTGAMMAWAG msaprobs
Site 672 none none

Q (0.399)
none

Q (0.402)
none

Q (0.407)
none

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Q (0.399)
none

Q (0.402)
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Q (0.407)
none

Q (0.404)
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Q (0.399)
none

Q (0.402)
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none

Q (0.404)
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Q (0.399)
none

Q (0.402)
none

Q (0.407)
none

Q (0.404)
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Q (0.399)
none

Q (0.402)
none

Q (0.407)
none

Q (0.404)
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Q (0.399)
none

Q (0.402)
none

Q (0.407)
none

Q (0.404)
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Q (0.399)
none

Q (0.402)
none

Q (0.407)
none

Q (0.404)
Site 679 none none

Q (0.399)
none

Q (0.402)
none

Q (0.407)
none

Q (0.404)
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Q (0.399)
none

Q (0.402)
none

Q (0.407)
none

Q (0.404)
Site 681 none none

R (0.347)
none

R (0.355)
none

R (0.319)
none

R (0.358)
Site 682 none none

Y (0.43)
none

Y (0.444)
none

Y (0.425)
none

Y (0.447)
Site 683 none none

M (0.319)
none

M (0.347)
none

M (0.341)
none

M (0.35)
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A (0.352)
none

A (0.373)
none

A (0.333)
none

A (0.376)
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Q (1.0)
none

Q (1.0)
none

Q (1.0)
none

Q (1.0)
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Q (1.0)
none

Q (1.0)
none

Q (1.0)
none

Q (1.0)
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Q (0.134)
none

Q (0.122)
none

Q (0.132)
none

Q (0.122)
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Y (1.0)
none

Y (1.0)
none

Y (1.0)
none

Y (1.0)
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F (1.0)
none

F (1.0)
none

F (1.0)
none

F (1.0)
Site 692 197: N none

Q (1.0)
none

Q (1.0)
none

Q (1.0)
none

Q (0.999)
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G (0.854)
none

G (0.882)
none

G (0.852)
none

G (0.897)
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M (0.413)
none

M (0.48)
none

M (0.429)
none

M (0.486)
Site 695 none none

Q (0.326)
none

Q (0.368)
none

Q (0.393)
none

Q (0.37)
Site 696 none none

N (0.808)
none

N (0.821)
none

N (0.791)
none

N (0.826)
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N (0.371)
none

N (0.389)
none

N (0.312)
none

N (0.393)
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N (0.808)
none

N (0.821)
none

N (0.791)
none

N (0.826)
Site in msaprobs Site in ABR....ancMcm1 PROTCATLG msaprobs PROTCATWAG msaprobs PROTCATJTT msaprobs PROTGAMMAWAG msaprobs
Site 699 199: V none

V (0.704)
none

V (0.749)
none

V (0.715)
none

V (0.769)
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E (0.999)
none

E (1.0)
none

E (0.999)
none

E (1.0)
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S (0.969)
none

S (0.969)
none

S (0.971)
none

s (0.976)
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Q (1.0)
none

Q (1.0)
none

Q (1.0)
none

Q (1.0)
Site 703 203: Q none

Q (1.0)
none

Q (1.0)
none

Q (1.0)
none

Q (1.0)
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N (0.998)
none

N (0.998)
none

N (0.999)
none

N (0.999)
Site 705 205: Q none

Q (0.995)
P (0.305)→
Q (0.998)
p (0.375)→
Q (0.988)
P (0.215)→
Q (0.999)
Site 706 206: Y none

Y (0.878)
W (0.191)→
Y (0.96)
W (0.193)→
Y (0.946)
S (0.155)→
Y (0.958)

Generated by PhyloBot at 04:47, October 21st 2018
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